Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Gm8738-201ENSMUST00000172606 329 ntBASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Gm38000-201ENSMUST00000192390 1215 ntBASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Gm5982-201ENSMUST00000196234 512 ntBASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 AC073947.1-201ENSMUST00000216991 649 ntBASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Gm38199-201ENSMUST00000192013 3277 ntBASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Gpr68-203ENSMUST00000110066 3223 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Wdr89-202ENSMUST00000187307 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccbe1Q3MI99 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Grik1-211ENSMUST00000228188 3221 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Cdh18-203ENSMUST00000164787 2744 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm6023-201ENSMUST00000118217 606 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm26927-201ENSMUST00000182385 965 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Mir7070-201ENSMUST00000183657 86 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm27320-201ENSMUST00000184892 109 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Mir8093-201ENSMUST00000185043 137 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm42859-201ENSMUST00000199572 193 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm18753-201ENSMUST00000201000 566 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 AC117245.3-201ENSMUST00000217495 2176 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 AC155637.1-201ENSMUST00000218560 636 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm45170-201ENSMUST00000206746 1671 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm37032-201ENSMUST00000194882 2975 ntBASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Ccbe1Q3MI99 Gm45797-201ENSMUST00000212759 1921 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms