Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Celf2-213ENSMUST00000150624 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm42683-201ENSMUST00000196136 2328 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Arhgap19-202ENSMUST00000163265 5058 ntTSL 5 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Jam2-202ENSMUST00000114195 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm38340-201ENSMUST00000195039 4008 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm37039-201ENSMUST00000193733 2485 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Fbxw11-202ENSMUST00000093205 3938 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm16026-206ENSMUST00000163068 2741 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm37122-201ENSMUST00000195313 1567 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm4995-201ENSMUST00000117247 432 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm22175-201ENSMUST00000175007 78 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm29164-201ENSMUST00000185454 1024 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm38294-201ENSMUST00000192831 381 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm45705-201ENSMUST00000211831 2134 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm9063-201ENSMUST00000223299 582 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Mgat4a-202ENSMUST00000143636 1802 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Ube2l3-202ENSMUST00000115699 2906 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm45139-201ENSMUST00000206543 2057 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Adcy9-202ENSMUST00000117801 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Stard13-208ENSMUST00000202111 3373 ntTSL 5 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Slco1b2-204ENSMUST00000203597 1965 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Pcdhga7-202ENSMUST00000193476 3044 ntAPPRIS ALT2 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm38111-201ENSMUST00000194817 2741 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm7789-202ENSMUST00000211273 1400 ntBASIC8.88□□□□□ -0.99
Trim63Q38HM4 A730032A03Rik-202ENSMUST00000143202 1928 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Gm44284-201ENSMUST00000203836 3444 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm35048-201ENSMUST00000192105 2802 ntBASIC8.87□□□□□ -0.99
Trim63Q38HM4 Zfp189-201ENSMUST00000042964 2835 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Vma21-202ENSMUST00000114576 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm35288-201ENSMUST00000216565 2731 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Arhgap36-201ENSMUST00000042444 2733 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Rad51d-201ENSMUST00000018985 3426 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm21854-201ENSMUST00000179901 471 ntBASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm9192-201ENSMUST00000183221 985 ntBASIC8.87□□□□□ -0.99
Trim63Q38HM4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Dubr-202ENSMUST00000186535 2896 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms