Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Gm13827-201ENSMUST00000148801 372 ntBASIC11.79□□□□□ -0.52
Col9a2Q07643 Gm24954-201ENSMUST00000178831 110 ntBASIC11.79□□□□□ -0.52
Col9a2Q07643 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.79□□□□□ -0.52
Col9a2Q07643 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC11.79□□□□□ -0.52
Col9a2Q07643 Gm28746-201ENSMUST00000187453 380 ntBASIC11.79□□□□□ -0.52
Col9a2Q07643 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.79□□□□□ -0.52
Col9a2Q07643 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC11.79□□□□□ -0.52
Col9a2Q07643 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.79□□□□□ -0.52
Col9a2Q07643 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Gm25514-201ENSMUST00000083860 135 ntBASIC11.79□□□□□ -0.52
Col9a2Q07643 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col9a2Q07643 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col9a2Q07643 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.79□□□□□ -0.52
Col9a2Q07643 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.79□□□□□ -0.52
Col9a2Q07643 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.79□□□□□ -0.52
Col9a2Q07643 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.79□□□□□ -0.52
Col9a2Q07643 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col9a2Q07643 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col9a2Q07643 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col9a2Q07643 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Col9a2Q07643 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col9a2Q07643 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm42521-201ENSMUST00000199190 2040 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col9a2Q07643 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm26368-201ENSMUST00000157826 118 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm37197-201ENSMUST00000195607 401 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm42689-201ENSMUST00000202403 404 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 BC080696-201ENSMUST00000202858 1218 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.78□□□□□ -0.52
Col9a2Q07643 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.78□□□□□ -0.52
Col9a2Q07643 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 Mir326-201ENSMUST00000083637 95 ntBASIC11.78□□□□□ -0.52
Col9a2Q07643 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
Col9a2Q07643 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.78□□□□□ -0.52
Col9a2Q07643 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.78□□□□□ -0.52
Col9a2Q07643 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a2Q07643 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col9a2Q07643 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.77□□□□□ -0.52
Col9a2Q07643 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col9a2Q07643 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col9a2Q07643 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC11.77□□□□□ -0.53
Col9a2Q07643 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.77□□□□□ -0.53
Col9a2Q07643 Gm24074-201ENSMUST00000158178 260 ntBASIC11.77□□□□□ -0.53
Col9a2Q07643 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Col9a2Q07643 Gm8451-201ENSMUST00000170338 447 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms