Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
GabpaQ00422 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
GabpaQ00422 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
GabpaQ00422 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Gm6441-201ENSMUST00000120983 696 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.34□□□□□ -0.43
GabpaQ00422 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC12.34□□□□□ -0.43
GabpaQ00422 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
GabpaQ00422 Gm25998-201ENSMUST00000175397 53 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Gm27316-201ENSMUST00000184884 277 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Gm18555-201ENSMUST00000197935 584 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Gm25514-201ENSMUST00000083860 135 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
GabpaQ00422 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.34□□□□□ -0.43
GabpaQ00422 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.33□□□□□ -0.43
GabpaQ00422 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
GabpaQ00422 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
GabpaQ00422 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.33□□□□□ -0.44
GabpaQ00422 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
GabpaQ00422 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.33□□□□□ -0.44
GabpaQ00422 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
GabpaQ00422 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
GabpaQ00422 Gm23769-201ENSMUST00000104441 121 ntBASIC12.33□□□□□ -0.44
GabpaQ00422 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
GabpaQ00422 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.33□□□□□ -0.44
GabpaQ00422 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.33□□□□□ -0.44
GabpaQ00422 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Mir8111-201ENSMUST00000184463 137 ntBASIC12.33□□□□□ -0.44
GabpaQ00422 Gm7445-201ENSMUST00000192115 340 ntBASIC12.33□□□□□ -0.44
GabpaQ00422 Trav11n-201ENSMUST00000200113 343 ntBASIC12.33□□□□□ -0.44
GabpaQ00422 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.33□□□□□ -0.44
GabpaQ00422 AC154806.7-201ENSMUST00000227998 202 ntBASIC12.33□□□□□ -0.44
GabpaQ00422 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.33□□□□□ -0.44
GabpaQ00422 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
GabpaQ00422 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
GabpaQ00422 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.33□□□□□ -0.44
GabpaQ00422 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
GabpaQ00422 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.33□□□□□ -0.44
GabpaQ00422 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.33□□□□□ -0.44
GabpaQ00422 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
GabpaQ00422 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GabpaQ00422 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GabpaQ00422 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GabpaQ00422 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GabpaQ00422 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GabpaQ00422 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.32□□□□□ -0.44
GabpaQ00422 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
GabpaQ00422 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.32□□□□□ -0.44
GabpaQ00422 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
GabpaQ00422 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GabpaQ00422 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GabpaQ00422 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GabpaQ00422 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GabpaQ00422 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC12.32□□□□□ -0.44
GabpaQ00422 Gm8152-201ENSMUST00000120842 637 ntBASIC12.32□□□□□ -0.44
GabpaQ00422 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
GabpaQ00422 Gm15982-201ENSMUST00000121681 554 ntBASIC12.32□□□□□ -0.44
GabpaQ00422 Gm16441-201ENSMUST00000138176 924 ntBASIC12.32□□□□□ -0.44
GabpaQ00422 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms