Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
SgcbP82349 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.81□□□□□ -0.84
SgcbP82349 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
SgcbP82349 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
SgcbP82349 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
SgcbP82349 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
SgcbP82349 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
SgcbP82349 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
SgcbP82349 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
SgcbP82349 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
SgcbP82349 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.8□□□□□ -0.84
SgcbP82349 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.8□□□□□ -0.84
SgcbP82349 Gm16044-201ENSMUST00000118475 450 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC9.8□□□□□ -0.84
SgcbP82349 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC9.8□□□□□ -0.84
SgcbP82349 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC9.8□□□□□ -0.84
SgcbP82349 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Gm16165-201ENSMUST00000160140 795 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.8□□□□□ -0.84
SgcbP82349 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
SgcbP82349 Gm9135-201ENSMUST00000182963 990 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
SgcbP82349 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.8□□□□□ -0.84
SgcbP82349 Gm9369-201ENSMUST00000196009 733 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Gm43830-201ENSMUST00000198760 1067 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Gm8190-201ENSMUST00000199603 586 ntBASIC9.8□□□□□ -0.84
SgcbP82349 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC9.8□□□□□ -0.84
SgcbP82349 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC9.8□□□□□ -0.84
SgcbP82349 Gm45733-201ENSMUST00000212988 437 ntBASIC9.8□□□□□ -0.84
SgcbP82349 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
SgcbP82349 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
SgcbP82349 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
SgcbP82349 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
SgcbP82349 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.8□□□□□ -0.84
SgcbP82349 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
SgcbP82349 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.8□□□□□ -0.84
SgcbP82349 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SgcbP82349 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SgcbP82349 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
SgcbP82349 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
SgcbP82349 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SgcbP82349 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
SgcbP82349 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
SgcbP82349 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SgcbP82349 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
SgcbP82349 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SgcbP82349 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC9.79□□□□□ -0.84
SgcbP82349 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
SgcbP82349 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
SgcbP82349 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC9.79□□□□□ -0.84
SgcbP82349 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SgcbP82349 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SgcbP82349 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SgcbP82349 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
SgcbP82349 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SgcbP82349 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.79□□□□□ -0.84
SgcbP82349 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms