Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.62□□□□□ -0.55
NrlP54846 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
NrlP54846 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
NrlP54846 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NrlP54846 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NrlP54846 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NrlP54846 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NrlP54846 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NrlP54846 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NrlP54846 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
NrlP54846 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.61□□□□□ -0.55
NrlP54846 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.61□□□□□ -0.55
NrlP54846 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
NrlP54846 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
NrlP54846 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
NrlP54846 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
NrlP54846 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.61□□□□□ -0.55
NrlP54846 Mir6953-201ENSMUST00000184745 68 ntBASIC11.61□□□□□ -0.55
NrlP54846 Gm37207-201ENSMUST00000194284 296 ntBASIC11.61□□□□□ -0.55
NrlP54846 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.61□□□□□ -0.55
NrlP54846 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.61□□□□□ -0.55
NrlP54846 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.61□□□□□ -0.55
NrlP54846 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
NrlP54846 Gm6331-201ENSMUST00000217890 450 ntBASIC11.61□□□□□ -0.55
NrlP54846 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.61□□□□□ -0.55
NrlP54846 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
NrlP54846 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
NrlP54846 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.61□□□□□ -0.55
NrlP54846 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NrlP54846 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.6□□□□□ -0.55
NrlP54846 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NrlP54846 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.6□□□□□ -0.55
NrlP54846 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
NrlP54846 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.6□□□□□ -0.55
NrlP54846 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.6□□□□□ -0.55
NrlP54846 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
NrlP54846 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
NrlP54846 Gm8019-201ENSMUST00000119317 587 ntBASIC11.6□□□□□ -0.55
NrlP54846 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.6□□□□□ -0.55
NrlP54846 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.6□□□□□ -0.55
NrlP54846 Gm5395-201ENSMUST00000121650 915 ntBASIC11.6□□□□□ -0.55
NrlP54846 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.6□□□□□ -0.55
NrlP54846 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Gm6612-201ENSMUST00000170777 395 ntBASIC11.6□□□□□ -0.55
NrlP54846 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.6□□□□□ -0.55
NrlP54846 Gm25872-201ENSMUST00000177784 100 ntBASIC11.6□□□□□ -0.55
NrlP54846 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.6□□□□□ -0.55
NrlP54846 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.6□□□□□ -0.55
NrlP54846 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.6□□□□□ -0.55
NrlP54846 Gm44640-201ENSMUST00000206894 247 ntBASIC11.6□□□□□ -0.55
NrlP54846 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC11.6□□□□□ -0.55
NrlP54846 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.6□□□□□ -0.55
NrlP54846 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.6□□□□□ -0.55
NrlP54846 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
NrlP54846 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NrlP54846 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
NrlP54846 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.6□□□□□ -0.55
NrlP54846 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms