Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Tnfrsf9P20334 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Tnfrsf9P20334 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Tnfrsf9P20334 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.31□□□□□ -0.92
Tnfrsf9P20334 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Tnfrsf9P20334 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Tnfrsf9P20334 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Tnfrsf9P20334 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm37859-201ENSMUST00000195529 2173 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Mro-202ENSMUST00000120033 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm25076-201ENSMUST00000104098 132 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm13916-201ENSMUST00000117368 628 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm16166-201ENSMUST00000118291 787 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm12948-201ENSMUST00000119406 682 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm11836-201ENSMUST00000121022 441 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm8737-201ENSMUST00000122208 642 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm23119-201ENSMUST00000158610 140 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm8531-201ENSMUST00000188319 893 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Platr10-202ENSMUST00000191479 818 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm42430-201ENSMUST00000197209 616 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm43596-201ENSMUST00000202818 884 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 AC126799.1-201ENSMUST00000221976 246 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 AC154515.3-201ENSMUST00000225081 1159 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 AC140375.1-201ENSMUST00000225421 694 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Vmn1r210-201ENSMUST00000072044 921 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm42942-201ENSMUST00000196086 1328 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Gm44753-201ENSMUST00000207739 2335 ntTSL 5 BASIC9.3□□□□□ -0.92
Tnfrsf9P20334 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Tnfrsf9P20334 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Tnfrsf9P20334 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Tnfrsf9P20334 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Tnfrsf9P20334 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.29□□□□□ -0.92
Tnfrsf9P20334 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Tnfrsf9P20334 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms