Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxb3P09026 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxb3P09026 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Hoxb3P09026 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb3P09026 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.21□□□□□ -0.61
Hoxb3P09026 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb3P09026 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb3P09026 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb3P09026 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb3P09026 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb3P09026 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb3P09026 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.21□□□□□ -0.61
Hoxb3P09026 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm9673-201ENSMUST00000119287 781 ntBASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm8019-201ENSMUST00000119317 587 ntBASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb3P09026 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxb3P09026 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Hoxb3P09026 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Hoxb3P09026 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb3P09026 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxb3P09026 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxb3P09026 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxb3P09026 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm26272-201ENSMUST00000179241 132 ntBASIC11.21□□□□□ -0.61
Hoxb3P09026 Mir7051-201ENSMUST00000184167 73 ntBASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm36974-201ENSMUST00000194200 1071 ntBASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm43671-201ENSMUST00000200422 433 ntBASIC11.21□□□□□ -0.61
Hoxb3P09026 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm18329-201ENSMUST00000215832 589 ntBASIC11.21□□□□□ -0.61
Hoxb3P09026 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Hoxb3P09026 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC11.21□□□□□ -0.61
Hoxb3P09026 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb3P09026 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxb3P09026 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxb3P09026 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Hoxb3P09026 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxb3P09026 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Hoxb3P09026 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxb3P09026 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxb3P09026 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Hoxb3P09026 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Hoxb3P09026 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxb3P09026 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxb3P09026 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxb3P09026 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxb3P09026 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxb3P09026 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Hoxb3P09026 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Hoxb3P09026 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Hoxb3P09026 AC153959.1-201ENSMUST00000213617 1694 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm8215-201ENSMUST00000120627 990 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm15279-201ENSMUST00000155593 288 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm3715-201ENSMUST00000172308 617 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Mir3100-201ENSMUST00000174918 65 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm29640-201ENSMUST00000187972 278 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm37284-201ENSMUST00000193607 539 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm45090-201ENSMUST00000208775 1148 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm18597-201ENSMUST00000209519 694 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.2□□□□□ -0.62
Hoxb3P09026 Gm18504-201ENSMUST00000220917 929 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 AC151902.1-201ENSMUST00000227800 375 ntBASIC11.2□□□□□ -0.62
Hoxb3P09026 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxb3P09026 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms