Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdgfrbP05622 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdgfrbP05622 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdgfrbP05622 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PdgfrbP05622 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdgfrbP05622 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdgfrbP05622 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdgfrbP05622 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdgfrbP05622 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PdgfrbP05622 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.12□□□□□ -0.63
PdgfrbP05622 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.12□□□□□ -0.63
PdgfrbP05622 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.12□□□□□ -0.63
PdgfrbP05622 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdgfrbP05622 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PdgfrbP05622 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.12□□□□□ -0.63
PdgfrbP05622 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PdgfrbP05622 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
PdgfrbP05622 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.11□□□□□ -0.63
PdgfrbP05622 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm12616-201ENSMUST00000118594 382 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm12624-201ENSMUST00000177615 382 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm12621-201ENSMUST00000177760 382 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm12615-201ENSMUST00000177970 382 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm12622-201ENSMUST00000177975 382 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm12627-201ENSMUST00000178412 382 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm12625-201ENSMUST00000179122 382 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm12614-201ENSMUST00000179586 382 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm12613-201ENSMUST00000180323 382 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm28941-201ENSMUST00000185536 1017 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm8581-201ENSMUST00000188636 890 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm17877-201ENSMUST00000192578 814 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm44845-201ENSMUST00000208773 335 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.11□□□□□ -0.63
PdgfrbP05622 AC115784.1-201ENSMUST00000227687 1010 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Gm25580-201ENSMUST00000083409 327 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
PdgfrbP05622 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.11□□□□□ -0.63
PdgfrbP05622 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PdgfrbP05622 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
PdgfrbP05622 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.1□□□□□ -0.63
PdgfrbP05622 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
PdgfrbP05622 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
PdgfrbP05622 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.1□□□□□ -0.63
PdgfrbP05622 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
PdgfrbP05622 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdgfrbP05622 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
PdgfrbP05622 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
PdgfrbP05622 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
PdgfrbP05622 Gm12663-201ENSMUST00000118481 958 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms