Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC8.81□□□□□ -1
P04940 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
P04940 Gm45594-201ENSMUST00000211717 241 ntBASIC8.81□□□□□ -1
P04940 AC164429.1-201ENSMUST00000224210 518 ntBASIC8.81□□□□□ -1
P04940 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC8.81□□□□□ -1
P04940 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC8.81□□□□□ -1
P04940 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
P04940 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
P04940 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
P04940 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
P04940 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
P04940 Gm29101-201ENSMUST00000188329 1471 ntBASIC8.81□□□□□ -1
P04940 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
P04940 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
P04940 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
P04940 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
P04940 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
P04940 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC8.81□□□□□ -1
P04940 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
P04940 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
P04940 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04940 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC8.8□□□□□ -1
P04940 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
P04940 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Gm42833-201ENSMUST00000196019 2124 ntBASIC8.8□□□□□ -1
P04940 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Gm10548-201ENSMUST00000097631 2629 ntBASIC8.8□□□□□ -1
P04940 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC8.8□□□□□ -1
P04940 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC8.8□□□□□ -1
P04940 Gm14270-201ENSMUST00000118388 846 ntBASIC8.8□□□□□ -1
P04940 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04940 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC8.8□□□□□ -1
P04940 Mir1956-201ENSMUST00000157748 65 ntBASIC8.8□□□□□ -1
P04940 Gm15744-201ENSMUST00000161734 213 ntBASIC8.8□□□□□ -1
P04940 Gm5529-201ENSMUST00000165691 891 ntBASIC8.8□□□□□ -1
P04940 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC8.8□□□□□ -1
P04940 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC8.8□□□□□ -1
P04940 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04940 Gm42710-201ENSMUST00000200608 985 ntBASIC8.8□□□□□ -1
P04940 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC8.8□□□□□ -1
P04940 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04940 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC8.8□□□□□ -1
P04940 Gm19009-201ENSMUST00000223072 823 ntBASIC8.8□□□□□ -1
P04940 AC124581.2-201ENSMUST00000225459 282 ntBASIC8.8□□□□□ -1
P04940 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
P04940 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC8.8□□□□□ -1
P04940 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Mirlet7i-201ENSMUST00000083472 85 ntBASIC8.8□□□□□ -1
P04940 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC8.8□□□□□ -1
P04940 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 AC153524.2-202ENSMUST00000220401 1794 ntBASIC8.8□□□□□ -1
P04940 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC8.8□□□□□ -1
P04940 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC8.8□□□□□ -1
P04940 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04940 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
P04940 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04940 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04940 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04940 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC8.8□□□□□ -1
P04940 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04940 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04940 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
P04940 Gm42499-201ENSMUST00000196193 1412 ntBASIC8.8□□□□□ -1
P04940 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04940 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04940 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC8.79□□□□□ -1
P04940 AC166359.1-201ENSMUST00000220243 1871 ntBASIC8.79□□□□□ -1
P04940 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC8.79□□□□□ -1
P04940 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC8.79□□□□□ -1
P04940 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Gm8684-201ENSMUST00000195078 1564 ntBASIC8.79□□□□□ -1
P04940 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
P04940 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC8.79□□□□□ -1
P04940 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC8.79□□□□□ -1
P04940 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04940 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms