Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gm37242-201ENSMUST00000191873 2085 ntBASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Gm13809-201ENSMUST00000117921 597 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Gm12997-201ENSMUST00000120207 640 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Gm9089-201ENSMUST00000122027 526 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Gm29199-201ENSMUST00000187766 775 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Gm6905-201ENSMUST00000205729 511 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 CT010431.1-201ENSMUST00000221249 1080 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Ntng1-201ENSMUST00000051253 327 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Rims2-204ENSMUST00000226410 3685 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.8□□□□□ -0.84
Pcdh1F7BJK1 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms