Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm22661-201ENSMUST00000104192 132 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm23129-201ENSMUST00000104259 132 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm15032-201ENSMUST00000118547 411 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm3687-201ENSMUST00000161710 460 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm24180-201ENSMUST00000179961 110 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Ighv5-1-201ENSMUST00000193324 353 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm9273-201ENSMUST00000200606 715 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm8083-201ENSMUST00000203976 475 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 CT009550.1-201ENSMUST00000225750 864 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm18646-201ENSMUST00000212240 1063 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Gm5189-201ENSMUST00000221796 261 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 AC132881.1-201ENSMUST00000223780 1062 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 CT571271.1-201ENSMUST00000227071 670 ntBASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col4a6B1AVK5 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm7790-201ENSMUST00000118716 1310 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm45110-201ENSMUST00000205704 1402 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm44907-201ENSMUST00000207423 1633 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm25804-201ENSMUST00000122785 188 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Mir3100-201ENSMUST00000174918 65 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Trav9n-1-201ENSMUST00000185224 339 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm37232-201ENSMUST00000194887 367 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm7319-201ENSMUST00000210047 778 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm18119-201ENSMUST00000219972 616 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 AC124772.3-201ENSMUST00000222535 575 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 CT025547.1-201ENSMUST00000225127 578 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms