Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Gm13422-201ENSMUST00000118834 504 ntBASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Mir6546-201ENSMUST00000184460 62 ntBASIC9.25□□□□□ -0.93
Gm3550W4VSN7 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 AC155637.1-201ENSMUST00000218560 636 ntBASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Gm9111-201ENSMUST00000219394 709 ntBASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Gm9387-201ENSMUST00000098624 1320 ntBASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3550W4VSN7 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm14592-201ENSMUST00000117201 560 ntBASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm16166-201ENSMUST00000118291 787 ntBASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm13408-201ENSMUST00000119822 798 ntBASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm4917-201ENSMUST00000121452 650 ntBASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm13935-201ENSMUST00000121859 798 ntBASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm3551-201ENSMUST00000190750 664 ntBASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm37826-201ENSMUST00000195329 322 ntBASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.24□□□□□ -0.93
Gm3550W4VSN7 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC9.24□□□□□ -0.93
Gm3550W4VSN7 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms