Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1aQ9QWF0 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1aQ9QWF0 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Gm16166-201ENSMUST00000118291 787 ntBASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Gm24992-201ENSMUST00000157412 130 ntBASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Mir7051-201ENSMUST00000184167 73 ntBASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Gm37981-201ENSMUST00000194280 535 ntBASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chaf1aQ9QWF0 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms