Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm25148-201ENSMUST00000104611 123 ntBASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm14130-201ENSMUST00000118417 987 ntBASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm27530-201ENSMUST00000184096 98 ntBASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm27441-201ENSMUST00000185000 105 ntBASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm43037-201ENSMUST00000196808 250 ntBASIC10.09□□□□□ -0.79
Trim13Q9CYB0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm45433-201ENSMUST00000209386 247 ntBASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.08□□□□□ -0.8
Trim13Q9CYB0 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Gm12380-201ENSMUST00000119012 544 ntBASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Gm38321-201ENSMUST00000195053 235 ntBASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Gm2965-201ENSMUST00000198365 343 ntBASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Gm45186-201ENSMUST00000206874 478 ntBASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Gm42535-201ENSMUST00000197312 1399 ntBASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim13Q9CYB0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Gm45657-201ENSMUST00000211318 1349 ntBASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.07□□□□□ -0.8
Trim13Q9CYB0 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms