Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Gm19091-201ENSMUST00000208120 978 ntBASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrc40Q9CRC8 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gm11952-201ENSMUST00000121172 821 ntBASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gm25343-201ENSMUST00000157460 107 ntBASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gm25580-201ENSMUST00000083409 327 ntBASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrc40Q9CRC8 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.81□□□□□ -0.68
Lrrc40Q9CRC8 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms