Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm9625-201ENSMUST00000180422 955 ntBASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm8384-201ENSMUST00000190905 704 ntBASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm2345-201ENSMUST00000193451 589 ntBASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm9102-201ENSMUST00000219250 465 ntBASIC9.62□□□□□ -0.87
Scrt1Q99M85 CT030166.5-201ENSMUST00000222249 420 ntBASIC9.62□□□□□ -0.87
Scrt1Q99M85 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm6478-201ENSMUST00000099450 742 ntBASIC9.62□□□□□ -0.87
Scrt1Q99M85 Rgr-203ENSMUST00000225070 4704 ntBASIC9.62□□□□□ -0.87
Scrt1Q99M85 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm42432-201ENSMUST00000197902 1617 ntBASIC9.62□□□□□ -0.87
Scrt1Q99M85 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Scrt1Q99M85 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.62□□□□□ -0.87
Scrt1Q99M85 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Scrt1Q99M85 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gm23745-201ENSMUST00000104230 125 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gm23769-201ENSMUST00000104441 121 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gm25148-201ENSMUST00000104611 123 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Snord23-201ENSMUST00000116828 109 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gm13094-201ENSMUST00000117930 409 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gm9133-201ENSMUST00000118289 540 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gm24078-201ENSMUST00000158184 103 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gm29067-201ENSMUST00000190821 470 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gm30946-201ENSMUST00000198288 724 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Ighv1-86-201ENSMUST00000200562 353 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 AC164556.1-201ENSMUST00000221318 751 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 AC169511.1-201ENSMUST00000227639 995 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gm44106-201ENSMUST00000203153 1599 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.61□□□□□ -0.87
Scrt1Q99M85 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms