Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm13281-201ENSMUST00000120871 567 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm14603-201ENSMUST00000121275 448 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm15031-201ENSMUST00000121341 210 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm11736-201ENSMUST00000121468 505 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm4775-201ENSMUST00000169588 402 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm9574-201ENSMUST00000173127 845 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm6686-201ENSMUST00000178455 258 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm5274-201ENSMUST00000182641 1003 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm17944-201ENSMUST00000186351 643 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm9619-201ENSMUST00000211587 762 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 AC165260.5-201ENSMUST00000224640 1247 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Atf7-201ENSMUST00000096143 390 ntBASIC11.57□□□□□ -0.56
Clp1Q99LI9 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clp1Q99LI9 Gm9877-201ENSMUST00000064271 2627 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm13286-201ENSMUST00000117750 537 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm12463-201ENSMUST00000118271 849 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm13608-201ENSMUST00000121807 1406 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm17782-201ENSMUST00000174345 880 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm27826-201ENSMUST00000175282 255 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm29304-201ENSMUST00000186555 695 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm29223-201ENSMUST00000188867 695 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm37921-201ENSMUST00000194333 695 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm34272-201ENSMUST00000208886 253 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm9520-201ENSMUST00000209460 1253 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm7242-201ENSMUST00000221134 705 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms