Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
StrcQ8VIM6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
StrcQ8VIM6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
StrcQ8VIM6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
StrcQ8VIM6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
StrcQ8VIM6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
StrcQ8VIM6 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
StrcQ8VIM6 Tead4-203ENSMUST00000130454 1718 ntTSL 5 BASIC12.63□□□□□ -0.39
StrcQ8VIM6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
StrcQ8VIM6 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
StrcQ8VIM6 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Gm14021-201ENSMUST00000117683 961 ntBASIC12.62□□□□□ -0.39
StrcQ8VIM6 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Klk11-201ENSMUST00000080211 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Gm14323-201ENSMUST00000122418 627 ntBASIC12.62□□□□□ -0.39
StrcQ8VIM6 Gm22987-201ENSMUST00000122757 246 ntBASIC12.62□□□□□ -0.39
StrcQ8VIM6 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Gm5652-201ENSMUST00000182336 1008 ntBASIC12.62□□□□□ -0.39
StrcQ8VIM6 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Mpv17-204ENSMUST00000200864 878 ntAPPRIS P3 TSL 3 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Ppp1r9a-206ENSMUST00000175962 3769 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
StrcQ8VIM6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Sdcbp2-201ENSMUST00000028950 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.61□□□□□ -0.39
StrcQ8VIM6 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 1700057H15Rik-202ENSMUST00000143859 704 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Gm18471-201ENSMUST00000208272 452 ntBASIC12.61□□□□□ -0.39
StrcQ8VIM6 AC154766.1-201ENSMUST00000226550 936 ntBASIC12.61□□□□□ -0.39
StrcQ8VIM6 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Gm16410-201ENSMUST00000094550 774 ntBASIC12.61□□□□□ -0.39
StrcQ8VIM6 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
StrcQ8VIM6 AC187103.1-202ENSMUST00000223904 1536 ntBASIC12.6□□□□□ -0.39
StrcQ8VIM6 Gm31763-202ENSMUST00000218205 1724 ntBASIC12.6□□□□□ -0.39
StrcQ8VIM6 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
StrcQ8VIM6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
StrcQ8VIM6 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
StrcQ8VIM6 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC12.6□□□□□ -0.39
StrcQ8VIM6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
StrcQ8VIM6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
StrcQ8VIM6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
StrcQ8VIM6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms