Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Gm7666-201ENSMUST00000146631 819 ntBASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Mir1938-201ENSMUST00000158746 100 ntBASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Gm2260-201ENSMUST00000184965 657 ntBASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Gm37246-201ENSMUST00000192665 835 ntBASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Gm1821-202ENSMUST00000227415 750 ntBASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Gm23105-201ENSMUST00000083719 134 ntBASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28aQ8CEI3 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Gm11836-201ENSMUST00000121022 441 ntBASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Gm14277-201ENSMUST00000121195 360 ntBASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Gm10774-201ENSMUST00000188689 204 ntBASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Gm5451-201ENSMUST00000080545 579 ntBASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28aQ8CEI3 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms