Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Mir453-201ENSMUST00000104732 82 ntBASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Gm16518-201ENSMUST00000117960 508 ntBASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Gm13937-201ENSMUST00000121000 988 ntBASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim9Q8C7M3 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Spata33-207ENSMUST00000212760 4074 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm13888-201ENSMUST00000119148 422 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm43097-201ENSMUST00000196867 151 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm31941-201ENSMUST00000209689 350 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm19009-201ENSMUST00000223072 823 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim9Q8C7M3 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Gm13182-201ENSMUST00000122241 312 ntBASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Gm8365-201ENSMUST00000197334 648 ntBASIC11.97□□□□□ -0.49
Trim9Q8C7M3 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.97□□□□□ -0.49
Trim9Q8C7M3 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.97□□□□□ -0.49
Trim9Q8C7M3 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim9Q8C7M3 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms