Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Gm43969-201ENSMUST00000204833 535 ntBASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh19Q80TF3 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh19Q80TF3 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.77□□□□□ -0.68
Pcdh19Q80TF3 Gm18719-201ENSMUST00000196696 1413 ntBASIC10.77□□□□□ -0.68
Pcdh19Q80TF3 Gm44863-201ENSMUST00000207613 1422 ntBASIC10.77□□□□□ -0.68
Pcdh19Q80TF3 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Pcdh19Q80TF3 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh19Q80TF3 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Gm22937-201ENSMUST00000103954 131 ntBASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Gm17214-201ENSMUST00000164501 541 ntBASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Gm7880-201ENSMUST00000203748 871 ntBASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh19Q80TF3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Gm13549-201ENSMUST00000118339 796 ntBASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Gm24074-201ENSMUST00000158178 260 ntBASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Gm42430-201ENSMUST00000197209 616 ntBASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms