Protein–RNA interactions for Protein: Q6P3B9

Rbfa, Putative ribosome-binding factor A, mitochondrial, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RbfaQ6P3B9 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.33□□□□□ -0.6
RbfaQ6P3B9 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RbfaQ6P3B9 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
RbfaQ6P3B9 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RbfaQ6P3B9 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Gm11996-201ENSMUST00000117538 915 ntBASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Gm11993-201ENSMUST00000121861 820 ntBASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.32□□□□□ -0.6
RbfaQ6P3B9 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Gm42710-201ENSMUST00000200608 985 ntBASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.32□□□□□ -0.6
RbfaQ6P3B9 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RbfaQ6P3B9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gm43564-201ENSMUST00000196185 211 ntBASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gm43506-201ENSMUST00000200675 753 ntBASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.31□□□□□ -0.6
RbfaQ6P3B9 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gm26782-203ENSMUST00000227103 751 ntBASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RbfaQ6P3B9 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
RbfaQ6P3B9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms