Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Rbm4-201ENSMUST00000164209 801 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 5031425E22Rik-203ENSMUST00000188328 828 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Gm18122-201ENSMUST00000211390 904 ntBASIC9.9□□□□□ -0.82
VcanQ62059 Gm18646-201ENSMUST00000212240 1063 ntBASIC9.9□□□□□ -0.82
VcanQ62059 AC140406.3-201ENSMUST00000227619 478 ntBASIC9.9□□□□□ -0.82
VcanQ62059 AC161581.1-201ENSMUST00000228696 318 ntBASIC9.9□□□□□ -0.82
VcanQ62059 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Gm45501-201ENSMUST00000211468 2526 ntBASIC9.9□□□□□ -0.82
VcanQ62059 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
VcanQ62059 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 AC115891.2-201ENSMUST00000218448 1341 ntBASIC9.9□□□□□ -0.82
VcanQ62059 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
VcanQ62059 Glns-ps1-201ENSMUST00000120291 1118 ntBASIC9.9□□□□□ -0.82
VcanQ62059 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.9□□□□□ -0.82
VcanQ62059 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC9.9□□□□□ -0.82
VcanQ62059 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC9.9□□□□□ -0.82
VcanQ62059 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC9.9□□□□□ -0.82
VcanQ62059 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC9.9□□□□□ -0.82
VcanQ62059 Gm32858-201ENSMUST00000205246 585 ntBASIC9.9□□□□□ -0.82
VcanQ62059 Gm18339-201ENSMUST00000218074 888 ntBASIC9.9□□□□□ -0.82
VcanQ62059 Gm19045-201ENSMUST00000222488 1193 ntBASIC9.9□□□□□ -0.82
VcanQ62059 AC141884.2-201ENSMUST00000228811 775 ntBASIC9.9□□□□□ -0.82
VcanQ62059 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
VcanQ62059 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
VcanQ62059 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
VcanQ62059 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
VcanQ62059 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
VcanQ62059 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
VcanQ62059 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
VcanQ62059 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
VcanQ62059 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.9□□□□□ -0.83
VcanQ62059 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
VcanQ62059 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.9□□□□□ -0.83
VcanQ62059 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
VcanQ62059 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.9□□□□□ -0.83
VcanQ62059 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
VcanQ62059 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
VcanQ62059 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC9.89□□□□□ -0.83
VcanQ62059 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC9.89□□□□□ -0.83
VcanQ62059 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC9.89□□□□□ -0.83
VcanQ62059 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.89□□□□□ -0.83
VcanQ62059 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.89□□□□□ -0.83
VcanQ62059 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Nps-203ENSMUST00000210907 1206 ntTSL 5 BASIC9.89□□□□□ -0.83
VcanQ62059 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VcanQ62059 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VcanQ62059 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VcanQ62059 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
VcanQ62059 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Enpp3-203ENSMUST00000218044 1346 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
VcanQ62059 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
VcanQ62059 Ighv2-5-201ENSMUST00000103449 347 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
VcanQ62059 Gm25561-201ENSMUST00000104607 125 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Gm12004-201ENSMUST00000117869 718 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Pip5k1bos-201ENSMUST00000126936 684 ntTSL 3 BASIC9.89□□□□□ -0.83
VcanQ62059 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Gm26483-201ENSMUST00000158016 104 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.89□□□□□ -0.83
VcanQ62059 Gm18901-201ENSMUST00000197840 1444 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC9.89□□□□□ -0.83
VcanQ62059 Serpina5-201ENSMUST00000021495 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Cib3-201ENSMUST00000098630 585 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
VcanQ62059 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Gm36990-201ENSMUST00000191961 1412 ntBASIC9.89□□□□□ -0.83
VcanQ62059 AC134898.1-201ENSMUST00000223738 1836 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC9.89□□□□□ -0.83
VcanQ62059 Gm11621-201ENSMUST00000118253 589 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms