Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Mthfd1-201ENSMUST00000021443 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Eif4e2-201ENSMUST00000050876 2869 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Gm13453-201ENSMUST00000118708 357 ntBASIC8.9□□□□□ -0.98
Trim63Q38HM4 Gm11637-201ENSMUST00000120601 592 ntBASIC8.9□□□□□ -0.98
Trim63Q38HM4 Gm9522-201ENSMUST00000182394 926 ntBASIC8.9□□□□□ -0.98
Trim63Q38HM4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Gm7775-201ENSMUST00000218871 853 ntBASIC8.9□□□□□ -0.98
Trim63Q38HM4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Gm2423-201ENSMUST00000074863 733 ntBASIC8.9□□□□□ -0.98
Trim63Q38HM4 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Ccdc148-201ENSMUST00000077687 3977 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Rhof-204ENSMUST00000186469 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Nupl1-201ENSMUST00000225805 3602 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
Trim63Q38HM4 Tgfbi-201ENSMUST00000045173 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gm39459-201ENSMUST00000215662 1895 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gm5846-201ENSMUST00000193146 1414 ntBASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gm44926-201ENSMUST00000207898 1826 ntBASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gria1-202ENSMUST00000094179 5399 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 AC153524.2-202ENSMUST00000220401 1794 ntBASIC8.89□□□□□ -0.99
Trim63Q38HM4 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Trpm5-201ENSMUST00000009390 4123 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC8.89□□□□□ -0.99
Trim63Q38HM4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC8.89□□□□□ -0.99
Trim63Q38HM4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Recql5os1-201ENSMUST00000134391 396 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gm27618-201ENSMUST00000183671 60 ntBASIC8.89□□□□□ -0.99
Trim63Q38HM4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gm37277-201ENSMUST00000194052 1111 ntBASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gm42588-201ENSMUST00000200538 1297 ntBASIC8.89□□□□□ -0.99
Trim63Q38HM4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 E330012B07Rik-202ENSMUST00000151979 2349 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Csnk2a1-201ENSMUST00000099224 4206 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Bag6-211ENSMUST00000173550 3536 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 AC117245.3-201ENSMUST00000217495 2176 ntBASIC8.89□□□□□ -0.99
Trim63Q38HM4 Aplf-202ENSMUST00000065997 3132 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 Gm18359-201ENSMUST00000173024 1459 ntBASIC8.89□□□□□ -0.99
Trim63Q38HM4 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim63Q38HM4 AC153498.1-201ENSMUST00000219775 2722 ntBASIC8.89□□□□□ -0.99
Trim63Q38HM4 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim63Q38HM4 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms