Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Mir1956-201ENSMUST00000157748 65 ntBASIC9.43□□□□□ -0.9
Otx1P80205 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Gm18159-201ENSMUST00000174516 1070 ntBASIC9.43□□□□□ -0.9
Otx1P80205 Rn7s6-201ENSMUST00000175005 291 ntBASIC9.43□□□□□ -0.9
Otx1P80205 Gm7985-201ENSMUST00000183329 981 ntBASIC9.43□□□□□ -0.9
Otx1P80205 Gm28388-201ENSMUST00000186262 437 ntBASIC9.43□□□□□ -0.9
Otx1P80205 Gm5865-201ENSMUST00000198713 637 ntBASIC9.43□□□□□ -0.9
Otx1P80205 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Gm43380-201ENSMUST00000200421 220 ntBASIC9.43□□□□□ -0.9
Otx1P80205 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.43□□□□□ -0.9
Otx1P80205 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.43□□□□□ -0.9
Otx1P80205 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Otx1P80205 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Otx1P80205 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.43□□□□□ -0.9
Otx1P80205 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.43□□□□□ -0.9
Otx1P80205 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Otx1P80205 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Otx1P80205 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.42□□□□□ -0.9
Otx1P80205 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Otx1P80205 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.42□□□□□ -0.9
Otx1P80205 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Otx1P80205 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.42□□□□□ -0.9
Otx1P80205 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.42□□□□□ -0.9
Otx1P80205 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Gm4879-201ENSMUST00000122190 1272 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.42□□□□□ -0.9
Otx1P80205 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Otx1P80205 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Gm19927-201ENSMUST00000185792 781 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Gm17877-201ENSMUST00000192578 814 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Gm6677-201ENSMUST00000195100 441 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Gm42518-201ENSMUST00000196277 938 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Gm42657-201ENSMUST00000201746 211 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Gm44158-201ENSMUST00000203881 505 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.42□□□□□ -0.9
Otx1P80205 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC9.42□□□□□ -0.9
Otx1P80205 Gm3028-201ENSMUST00000213805 1119 ntBASIC9.42□□□□□ -0.9
Otx1P80205 AC166341.2-201ENSMUST00000220571 120 ntBASIC9.42□□□□□ -0.9
Otx1P80205 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.42□□□□□ -0.9
Otx1P80205 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.42□□□□□ -0.9
Otx1P80205 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.42□□□□□ -0.9
Otx1P80205 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.42□□□□□ -0.9
Otx1P80205 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Otx1P80205 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Otx1P80205 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.42□□□□□ -0.9
Otx1P80205 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms