Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm6P62313 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.58□□□□□ -0.88
Lsm6P62313 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Lsm6P62313 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Lsm6P62313 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Lsm6P62313 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Lsm6P62313 Gm23061-201ENSMUST00000102348 116 ntBASIC9.58□□□□□ -0.88
Lsm6P62313 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Lsm6P62313 Gm12274-201ENSMUST00000120062 385 ntBASIC9.58□□□□□ -0.88
Lsm6P62313 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC9.58□□□□□ -0.88
Lsm6P62313 Gm25554-201ENSMUST00000158075 113 ntBASIC9.58□□□□□ -0.88
Lsm6P62313 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC9.58□□□□□ -0.88
Lsm6P62313 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.58□□□□□ -0.88
Lsm6P62313 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm6P62313 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.58□□□□□ -0.88
Lsm6P62313 Gm9463-201ENSMUST00000206707 601 ntBASIC9.58□□□□□ -0.88
Lsm6P62313 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm6P62313 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm6P62313 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.58□□□□□ -0.88
Lsm6P62313 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.58□□□□□ -0.88
Lsm6P62313 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.58□□□□□ -0.88
Lsm6P62313 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Lsm6P62313 Gm25580-201ENSMUST00000083409 327 ntBASIC9.58□□□□□ -0.88
Lsm6P62313 Snora73b-201ENSMUST00000083419 205 ntBASIC9.58□□□□□ -0.88
Lsm6P62313 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.58□□□□□ -0.88
Lsm6P62313 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.58□□□□□ -0.88
Lsm6P62313 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.58□□□□□ -0.88
Lsm6P62313 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Lsm6P62313 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.58□□□□□ -0.88
Lsm6P62313 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Lsm6P62313 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Lsm6P62313 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Lsm6P62313 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm6P62313 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.57□□□□□ -0.88
Lsm6P62313 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Lsm6P62313 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Lsm6P62313 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Lsm6P62313 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC9.57□□□□□ -0.88
Lsm6P62313 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Lsm6P62313 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Lsm6P62313 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Lsm6P62313 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 Gm3828-201ENSMUST00000121817 257 ntBASIC9.57□□□□□ -0.88
Lsm6P62313 Mir1893-201ENSMUST00000122565 83 ntBASIC9.57□□□□□ -0.88
Lsm6P62313 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Lsm6P62313 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Lsm6P62313 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.57□□□□□ -0.88
Lsm6P62313 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 Gm9550-201ENSMUST00000161130 862 ntBASIC9.57□□□□□ -0.88
Lsm6P62313 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Lsm6P62313 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.57□□□□□ -0.88
Lsm6P62313 Gm28624-201ENSMUST00000186430 2131 ntBASIC9.57□□□□□ -0.88
Lsm6P62313 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.57□□□□□ -0.88
Lsm6P62313 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm6P62313 Gm40414-201ENSMUST00000197608 481 ntBASIC9.57□□□□□ -0.88
Lsm6P62313 Gm5865-201ENSMUST00000198713 637 ntBASIC9.57□□□□□ -0.88
Lsm6P62313 Gm18561-201ENSMUST00000206027 804 ntBASIC9.57□□□□□ -0.88
Lsm6P62313 Gm8959-201ENSMUST00000213150 571 ntBASIC9.57□□□□□ -0.88
Lsm6P62313 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms