Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm25072-201ENSMUST00000175233 235 ntBASIC10.32□□□□□ -0.76
Nup43P59235 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Nup43P59235 Gm9723-201ENSMUST00000192100 457 ntBASIC10.32□□□□□ -0.76
Nup43P59235 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.32□□□□□ -0.76
Nup43P59235 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.32□□□□□ -0.76
Nup43P59235 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.32□□□□□ -0.76
Nup43P59235 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.32□□□□□ -0.76
Nup43P59235 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nup43P59235 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nup43P59235 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Nup43P59235 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Nup43P59235 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.32□□□□□ -0.76
Nup43P59235 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Nup43P59235 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.31□□□□□ -0.76
Nup43P59235 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Nup43P59235 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Nup43P59235 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.31□□□□□ -0.76
Nup43P59235 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.31□□□□□ -0.76
Nup43P59235 Gm23153-201ENSMUST00000175323 313 ntBASIC10.31□□□□□ -0.76
Nup43P59235 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.31□□□□□ -0.76
Nup43P59235 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.31□□□□□ -0.76
Nup43P59235 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.31□□□□□ -0.76
Nup43P59235 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.31□□□□□ -0.76
Nup43P59235 Gm7525-201ENSMUST00000219425 454 ntBASIC10.31□□□□□ -0.76
Nup43P59235 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.31□□□□□ -0.76
Nup43P59235 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC10.31□□□□□ -0.76
Nup43P59235 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Nup43P59235 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.31□□□□□ -0.76
Nup43P59235 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Nup43P59235 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Nup43P59235 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup43P59235 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nup43P59235 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
Nup43P59235 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Nup43P59235 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.3□□□□□ -0.76
Nup43P59235 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nup43P59235 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
Nup43P59235 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.3□□□□□ -0.76
Nup43P59235 Gm12389-201ENSMUST00000117696 418 ntBASIC10.3□□□□□ -0.76
Nup43P59235 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.3□□□□□ -0.76
Nup43P59235 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.3□□□□□ -0.76
Nup43P59235 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC10.3□□□□□ -0.76
Nup43P59235 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms