Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm42859-201ENSMUST00000199572 193 ntBASIC12.11□□□□□ -0.47
Tpm1P58771 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.11□□□□□ -0.47
Tpm1P58771 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tpm1P58771 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.11□□□□□ -0.47
Tpm1P58771 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.11□□□□□ -0.47
Tpm1P58771 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.11□□□□□ -0.47
Tpm1P58771 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.11□□□□□ -0.47
Tpm1P58771 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.11□□□□□ -0.47
Tpm1P58771 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tpm1P58771 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC12.1□□□□□ -0.47
Tpm1P58771 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Tpm1P58771 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tpm1P58771 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tpm1P58771 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tpm1P58771 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.1□□□□□ -0.47
Tpm1P58771 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Tpm1P58771 Gm27530-201ENSMUST00000184096 98 ntBASIC12.1□□□□□ -0.47
Tpm1P58771 Gm28746-201ENSMUST00000187453 380 ntBASIC12.1□□□□□ -0.47
Tpm1P58771 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Gm37284-201ENSMUST00000193607 539 ntBASIC12.1□□□□□ -0.47
Tpm1P58771 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.1□□□□□ -0.47
Tpm1P58771 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.1□□□□□ -0.47
Tpm1P58771 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.1□□□□□ -0.47
Tpm1P58771 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.1□□□□□ -0.47
Tpm1P58771 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tpm1P58771 Gm21811-201ENSMUST00000096485 930 ntBASIC12.1□□□□□ -0.47
Tpm1P58771 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tpm1P58771 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.1□□□□□ -0.47
Tpm1P58771 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Gm44445-201ENSMUST00000204075 2683 ntBASIC12.1□□□□□ -0.47
Tpm1P58771 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tpm1P58771 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tpm1P58771 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Tpm1P58771 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tpm1P58771 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC12.09□□□□□ -0.47
Tpm1P58771 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.09□□□□□ -0.47
Tpm1P58771 Gm15566-201ENSMUST00000121130 590 ntBASIC12.09□□□□□ -0.47
Tpm1P58771 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.09□□□□□ -0.47
Tpm1P58771 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.09□□□□□ -0.47
Tpm1P58771 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Tpm1P58771 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tpm1P58771 Gm28032-201ENSMUST00000184104 96 ntBASIC12.09□□□□□ -0.47
Tpm1P58771 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.09□□□□□ -0.47
Tpm1P58771 Gm19208-201ENSMUST00000213861 912 ntBASIC12.09□□□□□ -0.47
Tpm1P58771 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.09□□□□□ -0.47
Tpm1P58771 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.09□□□□□ -0.47
Tpm1P58771 Gm9111-201ENSMUST00000219394 709 ntBASIC12.09□□□□□ -0.47
Tpm1P58771 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tpm1P58771 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Tpm1P58771 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tpm1P58771 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tpm1P58771 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tpm1P58771 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tpm1P58771 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Tpm1P58771 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms