Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Gm5451-201ENSMUST00000080545 579 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SftpbP50405 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.11□□□□□ -0.63
SftpbP50405 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SftpbP50405 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SftpbP50405 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SftpbP50405 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SftpbP50405 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Gm16166-201ENSMUST00000118291 787 ntBASIC11.1□□□□□ -0.63
SftpbP50405 Gm12986-201ENSMUST00000119037 967 ntBASIC11.1□□□□□ -0.63
SftpbP50405 Gm15573-201ENSMUST00000119487 540 ntBASIC11.1□□□□□ -0.63
SftpbP50405 Gm4917-201ENSMUST00000121452 650 ntBASIC11.1□□□□□ -0.63
SftpbP50405 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.1□□□□□ -0.63
SftpbP50405 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.1□□□□□ -0.63
SftpbP50405 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SftpbP50405 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.1□□□□□ -0.63
SftpbP50405 Gm37826-201ENSMUST00000195329 322 ntBASIC11.1□□□□□ -0.63
SftpbP50405 Gm9555-201ENSMUST00000200908 583 ntBASIC11.1□□□□□ -0.63
SftpbP50405 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.1□□□□□ -0.63
SftpbP50405 Mt1-202ENSMUST00000211807 1085 ntBASIC11.1□□□□□ -0.63
SftpbP50405 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SftpbP50405 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
SftpbP50405 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SftpbP50405 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.1□□□□□ -0.63
SftpbP50405 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SftpbP50405 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.1□□□□□ -0.63
SftpbP50405 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SftpbP50405 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SftpbP50405 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SftpbP50405 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
SftpbP50405 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SftpbP50405 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SftpbP50405 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
SftpbP50405 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SftpbP50405 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SftpbP50405 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SftpbP50405 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SftpbP50405 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Gm11949-201ENSMUST00000117640 372 ntBASIC11.09□□□□□ -0.63
SftpbP50405 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.09□□□□□ -0.63
SftpbP50405 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SftpbP50405 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms