Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Gm25677-201ENSMUST00000174983 72 ntBASIC9.23□□□□□ -0.93
Ccl11P48298 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.23□□□□□ -0.93
Ccl11P48298 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.23□□□□□ -0.93
Ccl11P48298 Gm18014-201ENSMUST00000183369 817 ntBASIC9.23□□□□□ -0.93
Ccl11P48298 Gm28032-201ENSMUST00000184104 96 ntBASIC9.23□□□□□ -0.93
Ccl11P48298 Gm18801-201ENSMUST00000186616 536 ntBASIC9.23□□□□□ -0.93
Ccl11P48298 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Ccl11P48298 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Gm42751-201ENSMUST00000198065 559 ntBASIC9.23□□□□□ -0.93
Ccl11P48298 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Gm43460-201ENSMUST00000202491 1057 ntBASIC9.23□□□□□ -0.93
Ccl11P48298 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC9.23□□□□□ -0.93
Ccl11P48298 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC9.23□□□□□ -0.93
Ccl11P48298 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 BC106175-202ENSMUST00000219344 1213 ntBASIC9.23□□□□□ -0.93
Ccl11P48298 AC134601.2-201ENSMUST00000221071 130 ntBASIC9.23□□□□□ -0.93
Ccl11P48298 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Ccl11P48298 AC137871.1-201ENSMUST00000228278 475 ntBASIC9.23□□□□□ -0.93
Ccl11P48298 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Ccl11P48298 Gm6478-201ENSMUST00000099450 742 ntBASIC9.23□□□□□ -0.93
Ccl11P48298 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Ccl11P48298 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.23□□□□□ -0.93
Ccl11P48298 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Ccl11P48298 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.23□□□□□ -0.93
Ccl11P48298 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.23□□□□□ -0.93
Ccl11P48298 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Ccl11P48298 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl11P48298 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Gm14005-210ENSMUST00000225087 1413 ntBASIC9.22□□□□□ -0.93
Ccl11P48298 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.22□□□□□ -0.93
Ccl11P48298 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC9.22□□□□□ -0.93
Ccl11P48298 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Ccl11P48298 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Gm13981-201ENSMUST00000122360 447 ntBASIC9.22□□□□□ -0.93
Ccl11P48298 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC9.22□□□□□ -0.93
Ccl11P48298 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Ccl11P48298 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC9.22□□□□□ -0.93
Ccl11P48298 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Ccl11P48298 Gm43778-201ENSMUST00000199438 199 ntBASIC9.22□□□□□ -0.93
Ccl11P48298 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Ccl11P48298 Gm43506-201ENSMUST00000200675 753 ntBASIC9.22□□□□□ -0.93
Ccl11P48298 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.22□□□□□ -0.93
Ccl11P48298 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC9.22□□□□□ -0.93
Ccl11P48298 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC9.22□□□□□ -0.93
Ccl11P48298 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Ccl11P48298 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.22□□□□□ -0.93
Ccl11P48298 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Ccl11P48298 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.22□□□□□ -0.93
Ccl11P48298 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl11P48298 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms