Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC11.22□□□□□ -0.61
Cxcl12P40224 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC11.22□□□□□ -0.61
Cxcl12P40224 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Cxcl12P40224 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.22□□□□□ -0.61
Cxcl12P40224 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.22□□□□□ -0.61
Cxcl12P40224 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC11.22□□□□□ -0.61
Cxcl12P40224 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Gm38111-201ENSMUST00000194817 2741 ntBASIC11.22□□□□□ -0.61
Cxcl12P40224 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Gm3791-201ENSMUST00000220790 768 ntBASIC11.22□□□□□ -0.61
Cxcl12P40224 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.22□□□□□ -0.61
Cxcl12P40224 AC192333.3-201ENSMUST00000224041 463 ntBASIC11.22□□□□□ -0.61
Cxcl12P40224 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Cxcl12P40224 Klf10-203ENSMUST00000227920 2144 ntBASIC11.22□□□□□ -0.61
Cxcl12P40224 AC123061.1-201ENSMUST00000228021 999 ntBASIC11.22□□□□□ -0.61
Cxcl12P40224 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Cxcl12P40224 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl12P40224 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.22□□□□□ -0.61
Cxcl12P40224 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cxcl12P40224 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm6713-201ENSMUST00000216137 1446 ntBASIC11.21□□□□□ -0.61
Cxcl12P40224 A1cf-204ENSMUST00000224564 1432 ntBASIC11.21□□□□□ -0.61
Cxcl12P40224 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm24066-201ENSMUST00000104515 131 ntBASIC11.21□□□□□ -0.61
Cxcl12P40224 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm13758-201ENSMUST00000118699 743 ntBASIC11.21□□□□□ -0.61
Cxcl12P40224 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm25154-201ENSMUST00000157123 119 ntBASIC11.21□□□□□ -0.61
Cxcl12P40224 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.21□□□□□ -0.61
Cxcl12P40224 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm19798-201ENSMUST00000201502 457 ntBASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm44388-201ENSMUST00000204350 258 ntBASIC11.21□□□□□ -0.61
Cxcl12P40224 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.21□□□□□ -0.61
Cxcl12P40224 AC166061.1-201ENSMUST00000225163 1138 ntBASIC11.21□□□□□ -0.61
Cxcl12P40224 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cxcl12P40224 AC163646.3-201ENSMUST00000228879 772 ntBASIC11.21□□□□□ -0.61
Cxcl12P40224 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl12P40224 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl12P40224 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cxcl12P40224 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl12P40224 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl12P40224 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl12P40224 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl12P40224 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl12P40224 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl12P40224 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.21□□□□□ -0.62
Cxcl12P40224 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl12P40224 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl12P40224 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Cxcl12P40224 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl12P40224 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl12P40224 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl12P40224 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cxcl12P40224 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl12P40224 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl12P40224 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl12P40224 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl12P40224 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl12P40224 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl12P40224 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms