Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC9.54□□□□□ -0.88
Upk2P38575 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.54□□□□□ -0.88
Upk2P38575 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.54□□□□□ -0.88
Upk2P38575 Gm14460-201ENSMUST00000121511 639 ntBASIC9.54□□□□□ -0.88
Upk2P38575 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Upk2P38575 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.54□□□□□ -0.88
Upk2P38575 Gm22138-201ENSMUST00000158748 128 ntBASIC9.54□□□□□ -0.88
Upk2P38575 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Gm5244-201ENSMUST00000164001 339 ntBASIC9.54□□□□□ -0.88
Upk2P38575 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Upk2P38575 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Upk2P38575 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Gm18827-201ENSMUST00000188341 790 ntBASIC9.54□□□□□ -0.88
Upk2P38575 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Gm42657-201ENSMUST00000201746 211 ntBASIC9.54□□□□□ -0.88
Upk2P38575 Gm43947-201ENSMUST00000203019 959 ntBASIC9.54□□□□□ -0.88
Upk2P38575 Gm33080-201ENSMUST00000205429 172 ntBASIC9.54□□□□□ -0.88
Upk2P38575 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.54□□□□□ -0.88
Upk2P38575 Gm8162-201ENSMUST00000213951 665 ntBASIC9.54□□□□□ -0.88
Upk2P38575 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC9.54□□□□□ -0.88
Upk2P38575 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Upk2P38575 AC099645.1-201ENSMUST00000226476 1105 ntBASIC9.54□□□□□ -0.88
Upk2P38575 Gm14267-206ENSMUST00000226870 1209 ntBASIC9.54□□□□□ -0.88
Upk2P38575 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Upk2P38575 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Upk2P38575 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.54□□□□□ -0.88
Upk2P38575 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Upk2P38575 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Upk2P38575 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.54□□□□□ -0.88
Upk2P38575 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.54□□□□□ -0.88
Upk2P38575 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Upk2P38575 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC9.53□□□□□ -0.88
Upk2P38575 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Upk2P38575 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Upk2P38575 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Upk2P38575 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC9.53□□□□□ -0.88
Upk2P38575 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC9.53□□□□□ -0.88
Upk2P38575 Gm12389-201ENSMUST00000117696 418 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Gm12616-201ENSMUST00000118594 382 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC9.53□□□□□ -0.88
Upk2P38575 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.53□□□□□ -0.88
Upk2P38575 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Upk2P38575 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.53□□□□□ -0.88
Upk2P38575 Gm12624-201ENSMUST00000177615 382 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Gm12621-201ENSMUST00000177760 382 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Gm12615-201ENSMUST00000177970 382 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Gm12622-201ENSMUST00000177975 382 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Gm12627-201ENSMUST00000178412 382 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Gm12625-201ENSMUST00000179122 382 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Gm12614-201ENSMUST00000179586 382 ntBASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms