Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Platr10-202ENSMUST00000191479 818 ntBASIC11.25□□□□□ -0.61
Nfkb1P25799 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Gm19918-201ENSMUST00000194858 400 ntBASIC11.25□□□□□ -0.61
Nfkb1P25799 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.24□□□□□ -0.61
Nfkb1P25799 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.24□□□□□ -0.61
Nfkb1P25799 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.24□□□□□ -0.61
Nfkb1P25799 Gm11979-201ENSMUST00000119629 743 ntBASIC11.24□□□□□ -0.61
Nfkb1P25799 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.24□□□□□ -0.61
Nfkb1P25799 Gm43506-201ENSMUST00000200675 753 ntBASIC11.24□□□□□ -0.61
Nfkb1P25799 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.24□□□□□ -0.61
Nfkb1P25799 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.24□□□□□ -0.61
Nfkb1P25799 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nfkb1P25799 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nfkb1P25799 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.24□□□□□ -0.61
Nfkb1P25799 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.24□□□□□ -0.61
Nfkb1P25799 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nfkb1P25799 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.23□□□□□ -0.61
Nfkb1P25799 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nfkb1P25799 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nfkb1P25799 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nfkb1P25799 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.23□□□□□ -0.61
Nfkb1P25799 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nfkb1P25799 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nfkb1P25799 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nfkb1P25799 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nfkb1P25799 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nfkb1P25799 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.23□□□□□ -0.61
Nfkb1P25799 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nfkb1P25799 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nfkb1P25799 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nfkb1P25799 Gm15036-201ENSMUST00000118880 400 ntBASIC11.23□□□□□ -0.61
Nfkb1P25799 Gm15136-201ENSMUST00000120552 533 ntBASIC11.23□□□□□ -0.61
Nfkb1P25799 Gm12712-201ENSMUST00000120676 801 ntBASIC11.23□□□□□ -0.61
Nfkb1P25799 Gm11354-201ENSMUST00000121974 422 ntBASIC11.23□□□□□ -0.61
Nfkb1P25799 Mir1893-201ENSMUST00000122565 83 ntBASIC11.23□□□□□ -0.61
Nfkb1P25799 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nfkb1P25799 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nfkb1P25799 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.23□□□□□ -0.61
Nfkb1P25799 Gm20392-201ENSMUST00000173047 701 ntBASIC11.23□□□□□ -0.61
Nfkb1P25799 Gm25677-201ENSMUST00000174983 72 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms