Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Gm13600-201ENSMUST00000117949 744 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Gm15982-201ENSMUST00000121681 554 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 Gm12453-201ENSMUST00000121981 331 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 Gm15620-201ENSMUST00000122949 270 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.09□□□□□ -0.95
Col8a2P25318 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC9.09□□□□□ -0.95
Col8a2P25318 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Mir6941-201ENSMUST00000184711 59 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 Gm19918-201ENSMUST00000194858 400 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.09□□□□□ -0.95
Col8a2P25318 Gm43460-201ENSMUST00000202491 1057 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC9.09□□□□□ -0.95
Col8a2P25318 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 Gm18035-201ENSMUST00000211962 589 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Col8a2P25318 Gm5178-201ENSMUST00000219380 898 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 AC154361.2-201ENSMUST00000224747 943 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.09□□□□□ -0.95
Col8a2P25318 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.09□□□□□ -0.95
Col8a2P25318 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col8a2P25318 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.09□□□□□ -0.95
Col8a2P25318 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.09□□□□□ -0.95
Col8a2P25318 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Col8a2P25318 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.96
Col8a2P25318 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.09□□□□□ -0.96
Col8a2P25318 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.09□□□□□ -0.96
Col8a2P25318 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.96
Col8a2P25318 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.08□□□□□ -0.96
Col8a2P25318 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Col8a2P25318 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC9.08□□□□□ -0.96
Col8a2P25318 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Col8a2P25318 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.08□□□□□ -0.96
Col8a2P25318 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Col8a2P25318 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Col8a2P25318 Gm15136-201ENSMUST00000120552 533 ntBASIC9.08□□□□□ -0.96
Col8a2P25318 Gm12745-201ENSMUST00000121767 214 ntBASIC9.08□□□□□ -0.96
Col8a2P25318 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC9.08□□□□□ -0.96
Col8a2P25318 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC9.08□□□□□ -0.96
Col8a2P25318 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC9.08□□□□□ -0.96
Col8a2P25318 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Col8a2P25318 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.08□□□□□ -0.96
Col8a2P25318 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Col8a2P25318 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.08□□□□□ -0.96
Col8a2P25318 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.08□□□□□ -0.96
Col8a2P25318 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.08□□□□□ -0.96
Col8a2P25318 Gm5641-201ENSMUST00000091130 1488 ntBASIC9.08□□□□□ -0.96
Col8a2P25318 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.08□□□□□ -0.96
Col8a2P25318 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col8a2P25318 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms