Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chmp6P0C0A3 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm15744-201ENSMUST00000161734 213 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm9358-201ENSMUST00000183067 927 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Mir6407-201ENSMUST00000184510 101 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm42518-201ENSMUST00000196277 938 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm6439-201ENSMUST00000199849 862 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm44158-201ENSMUST00000203881 505 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chmp6P0C0A3 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.87□□□□□ -0.51
Chmp6P0C0A3 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms