Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CopeO89079 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
CopeO89079 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.19□□□□□ -0.62
CopeO89079 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.19□□□□□ -0.62
CopeO89079 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.19□□□□□ -0.62
CopeO89079 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.19□□□□□ -0.62
CopeO89079 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.19□□□□□ -0.62
CopeO89079 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.19□□□□□ -0.62
CopeO89079 Gm37852-201ENSMUST00000193027 350 ntBASIC11.19□□□□□ -0.62
CopeO89079 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.19□□□□□ -0.62
CopeO89079 Gm5865-201ENSMUST00000198713 637 ntBASIC11.19□□□□□ -0.62
CopeO89079 Gm45186-201ENSMUST00000206874 478 ntBASIC11.19□□□□□ -0.62
CopeO89079 Gm5369-201ENSMUST00000217499 588 ntBASIC11.19□□□□□ -0.62
CopeO89079 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.19□□□□□ -0.62
CopeO89079 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.19□□□□□ -0.62
CopeO89079 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
CopeO89079 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CopeO89079 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CopeO89079 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CopeO89079 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.19□□□□□ -0.62
CopeO89079 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CopeO89079 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CopeO89079 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.19□□□□□ -0.62
CopeO89079 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
CopeO89079 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CopeO89079 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CopeO89079 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Gm12419-201ENSMUST00000116649 636 ntBASIC11.18□□□□□ -0.62
CopeO89079 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.18□□□□□ -0.62
CopeO89079 Gm12986-201ENSMUST00000119037 967 ntBASIC11.18□□□□□ -0.62
CopeO89079 Gm14017-201ENSMUST00000121934 386 ntBASIC11.18□□□□□ -0.62
CopeO89079 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.18□□□□□ -0.62
CopeO89079 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.18□□□□□ -0.62
CopeO89079 Gm37246-201ENSMUST00000192665 835 ntBASIC11.18□□□□□ -0.62
CopeO89079 Gm37835-201ENSMUST00000193305 361 ntBASIC11.18□□□□□ -0.62
CopeO89079 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CopeO89079 Gm19091-201ENSMUST00000208120 978 ntBASIC11.18□□□□□ -0.62
CopeO89079 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.18□□□□□ -0.62
CopeO89079 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.18□□□□□ -0.62
CopeO89079 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
CopeO89079 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.18□□□□□ -0.62
CopeO89079 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.18□□□□□ -0.62
CopeO89079 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CopeO89079 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.18□□□□□ -0.62
CopeO89079 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC11.18□□□□□ -0.62
CopeO89079 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CopeO89079 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC11.17□□□□□ -0.62
CopeO89079 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.17□□□□□ -0.62
CopeO89079 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC11.17□□□□□ -0.62
CopeO89079 Gm14395-201ENSMUST00000120494 563 ntBASIC11.17□□□□□ -0.62
CopeO89079 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.17□□□□□ -0.62
CopeO89079 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.17□□□□□ -0.62
CopeO89079 Gm7666-201ENSMUST00000146631 819 ntBASIC11.17□□□□□ -0.62
CopeO89079 Gm4812-201ENSMUST00000182847 993 ntBASIC11.17□□□□□ -0.62
CopeO89079 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11.17□□□□□ -0.62
CopeO89079 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms