Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Gm12345-201ENSMUST00000119288 898 ntBASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Gm7833-201ENSMUST00000183288 990 ntBASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 CU025215.1-201ENSMUST00000222986 603 ntBASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 AC163638.2-201ENSMUST00000224920 827 ntBASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 AC122881.1-201ENSMUST00000225757 2695 ntBASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
B020004C17RikJ3QP07 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm13192-201ENSMUST00000101199 208 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm14571-201ENSMUST00000118292 570 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm12435-201ENSMUST00000118949 1016 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm10443-201ENSMUST00000119024 210 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm14997-201ENSMUST00000119232 636 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm11544-201ENSMUST00000120215 382 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm26208-201ENSMUST00000158677 124 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm20568-201ENSMUST00000197129 208 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 AC124356.1-201ENSMUST00000221469 698 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
B020004C17RikJ3QP07 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Gm13286-201ENSMUST00000117750 537 ntBASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Gm16518-201ENSMUST00000117960 508 ntBASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Gm14633-201ENSMUST00000121152 470 ntBASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Gm8464-202ENSMUST00000146697 1142 ntBASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Gm4750-201ENSMUST00000151942 1142 ntBASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Gm25591-201ENSMUST00000177317 94 ntBASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Gm6216-201ENSMUST00000182390 687 ntBASIC12.18□□□□□ -0.46
B020004C17RikJ3QP07 Gm29304-201ENSMUST00000186555 695 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 142.8 ms