Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Vps45-201ENSMUST00000015891 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 AC155300.1-201ENSMUST00000219134 480 ntBASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 AC123533.3-201ENSMUST00000228056 454 ntBASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 BC043934-202ENSMUST00000185694 2356 ntBASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Gm12570-201ENSMUST00000122047 1030 ntBASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Gm5766-202ENSMUST00000161633 799 ntBASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 AC121357.1-201ENSMUST00000227365 608 ntBASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Gm44663-201ENSMUST00000206898 3150 ntBASIC19.62■□□□□ 0.73
Ccdc180J3QNE4 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Gm5046-201ENSMUST00000100608 611 ntBASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Gm6939-201ENSMUST00000122029 864 ntBASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 AC149294.3-201ENSMUST00000226888 732 ntBASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 AC174647.1-201ENSMUST00000227419 1271 ntBASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Gm8615-201ENSMUST00000025307 771 ntBASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc180J3QNE4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Gm20474-201ENSMUST00000180089 596 ntBASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Gm9864-201ENSMUST00000090043 1656 ntBASIC19.6■□□□□ 0.73
Ccdc180J3QNE4 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc180J3QNE4 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc180J3QNE4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc180J3QNE4 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc180J3QNE4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc180J3QNE4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc180J3QNE4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc180J3QNE4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc180J3QNE4 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc180J3QNE4 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms