Protein–RNA interactions for Protein: F8VQC1

Srp72, Signal recognition particle subunit SRP72, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp72F8VQC1 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.68□□□□□ -0.7
Srp72F8VQC1 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Gm12165-201ENSMUST00000117047 342 ntBASIC10.68□□□□□ -0.7
Srp72F8VQC1 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.68□□□□□ -0.7
Srp72F8VQC1 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.68□□□□□ -0.7
Srp72F8VQC1 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.68□□□□□ -0.7
Srp72F8VQC1 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.68□□□□□ -0.7
Srp72F8VQC1 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.67□□□□□ -0.7
Srp72F8VQC1 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.67□□□□□ -0.7
Srp72F8VQC1 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.67□□□□□ -0.7
Srp72F8VQC1 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.67□□□□□ -0.7
Srp72F8VQC1 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Gm23045-201ENSMUST00000175041 96 ntBASIC10.67□□□□□ -0.7
Srp72F8VQC1 Gm21092-201ENSMUST00000178995 955 ntBASIC10.67□□□□□ -0.7
Srp72F8VQC1 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.67□□□□□ -0.7
Srp72F8VQC1 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.67□□□□□ -0.7
Srp72F8VQC1 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.67□□□□□ -0.7
Srp72F8VQC1 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Srp72F8VQC1 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.66□□□□□ -0.7
Srp72F8VQC1 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Srp72F8VQC1 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms