Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.08□□□□□ -0.48
Brpf3B2KF05 Gm22614-201ENSMUST00000178300 165 ntBASIC12.08□□□□□ -0.48
Brpf3B2KF05 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Brpf3B2KF05 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Brpf3B2KF05 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Gm5733-201ENSMUST00000190232 939 ntBASIC12.08□□□□□ -0.48
Brpf3B2KF05 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Gm8574-201ENSMUST00000203207 924 ntBASIC12.08□□□□□ -0.48
Brpf3B2KF05 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.08□□□□□ -0.48
Brpf3B2KF05 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC12.08□□□□□ -0.48
Brpf3B2KF05 CT025645.2-201ENSMUST00000223278 3827 ntBASIC12.08□□□□□ -0.48
Brpf3B2KF05 AC106830.1-201ENSMUST00000228032 1003 ntBASIC12.08□□□□□ -0.48
Brpf3B2KF05 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Gm22042-201ENSMUST00000082989 165 ntBASIC12.08□□□□□ -0.48
Brpf3B2KF05 Gm26110-201ENSMUST00000083971 165 ntBASIC12.08□□□□□ -0.48
Brpf3B2KF05 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Brpf3B2KF05 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Brpf3B2KF05 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brpf3B2KF05 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.08□□□□□ -0.48
Brpf3B2KF05 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Gm15566-201ENSMUST00000121130 590 ntBASIC12.07□□□□□ -0.48
Brpf3B2KF05 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.07□□□□□ -0.48
Brpf3B2KF05 Gm14381-201ENSMUST00000122105 414 ntBASIC12.07□□□□□ -0.48
Brpf3B2KF05 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.07□□□□□ -0.48
Brpf3B2KF05 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Gm28195-201ENSMUST00000186992 372 ntBASIC12.07□□□□□ -0.48
Brpf3B2KF05 Gm38266-201ENSMUST00000194931 421 ntBASIC12.07□□□□□ -0.48
Brpf3B2KF05 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.07□□□□□ -0.48
Brpf3B2KF05 Gm44551-201ENSMUST00000208804 171 ntBASIC12.07□□□□□ -0.48
Brpf3B2KF05 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.07□□□□□ -0.48
Brpf3B2KF05 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.07□□□□□ -0.48
Brpf3B2KF05 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Gm13126-201ENSMUST00000117079 3063 ntBASIC12.07□□□□□ -0.48
Brpf3B2KF05 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brpf3B2KF05 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Brpf3B2KF05 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brpf3B2KF05 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brpf3B2KF05 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Brpf3B2KF05 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Brpf3B2KF05 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Brpf3B2KF05 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Brpf3B2KF05 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brpf3B2KF05 Gm37975-201ENSMUST00000195494 2099 ntBASIC12.06□□□□□ -0.48
Brpf3B2KF05 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Brpf3B2KF05 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brpf3B2KF05 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Brpf3B2KF05 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brpf3B2KF05 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms