Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Gm25226-201ENSMUST00000158198 123 ntBASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Gm5244-201ENSMUST00000164001 339 ntBASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Gm9463-201ENSMUST00000206707 601 ntBASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Gm18042-201ENSMUST00000219887 790 ntBASIC11.33□□□□□ -0.6
Cpne8Q9DC53 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.33□□□□□ -0.6
Cpne8Q9DC53 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpne8Q9DC53 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm15554-201ENSMUST00000120406 913 ntBASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm44155-201ENSMUST00000203923 412 ntBASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.32□□□□□ -0.6
Cpne8Q9DC53 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.32□□□□□ -0.6
Cpne8Q9DC53 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpne8Q9DC53 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms