Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Gm13019-201ENSMUST00000120000 276 ntBASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Mir1893-201ENSMUST00000122565 83 ntBASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Gm25343-201ENSMUST00000157460 107 ntBASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Bcl2-202ENSMUST00000189999 2841 ntBASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Gm42997-202ENSMUST00000200321 985 ntBASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Spata33-207ENSMUST00000212760 4074 ntBASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Gm23680-201ENSMUST00000083162 164 ntBASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Snora73b-201ENSMUST00000083419 205 ntBASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 AC129336.2-201ENSMUST00000218053 3086 ntBASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC13.77□□□□□ -0.21
Chmp4bQ9D8B3 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Gm23061-201ENSMUST00000102348 116 ntBASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Gm12516-201ENSMUST00000120819 385 ntBASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Gm26134-201ENSMUST00000178484 110 ntBASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Gm17877-201ENSMUST00000192578 814 ntBASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 AC159196.1-201ENSMUST00000225524 377 ntBASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 CT025679.1-201ENSMUST00000227106 449 ntBASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Gm25580-201ENSMUST00000083409 327 ntBASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Gm10179-201ENSMUST00000086233 688 ntBASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Gm28624-201ENSMUST00000186430 2131 ntBASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4bQ9D8B3 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Gm15264-201ENSMUST00000118050 502 ntBASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Mir7076-201ENSMUST00000183519 74 ntBASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Gm37986-201ENSMUST00000193285 383 ntBASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Gm40414-201ENSMUST00000197608 481 ntBASIC13.75□□□□□ -0.21
Chmp4bQ9D8B3 Gm5865-201ENSMUST00000198713 637 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms