Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm13899-201ENSMUST00000121519 1255 ntBASIC10.11□□□□□ -0.79
Trim13Q9CYB0 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm26361-201ENSMUST00000158868 186 ntBASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm38216-201ENSMUST00000194872 1214 ntBASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Gm15236-201ENSMUST00000117309 379 ntBASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Gm12247-201ENSMUST00000117585 670 ntBASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Gm15711-201ENSMUST00000118889 535 ntBASIC10.1□□□□□ -0.79
Trim13Q9CYB0 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Gm32111-201ENSMUST00000207689 846 ntBASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.1□□□□□ -0.79
Trim13Q9CYB0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim13Q9CYB0 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim13Q9CYB0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms