Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.94□□□□□ -0.02
Rtn4Q99P72 Gm10288-201ENSMUST00000084614 537 ntBASIC14.94□□□□□ -0.02
Rtn4Q99P72 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rtn4Q99P72 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rtn4Q99P72 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.94□□□□□ -0.02
Rtn4Q99P72 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rtn4Q99P72 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rtn4Q99P72 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rtn4Q99P72 Gm13135-201ENSMUST00000117628 3121 ntBASIC14.94□□□□□ -0.02
Rtn4Q99P72 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rtn4Q99P72 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rtn4Q99P72 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC14.94□□□□□ -0.02
Rtn4Q99P72 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Rtn4Q99P72 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm46199-201ENSMUST00000220373 1693 ntBASIC14.93□□□□□ -0.02
Rtn4Q99P72 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm7405-201ENSMUST00000121476 1337 ntBASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm23912-201ENSMUST00000104687 87 ntBASIC14.93□□□□□ -0.02
Rtn4Q99P72 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC14.93□□□□□ -0.02
Rtn4Q99P72 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm2966-201ENSMUST00000166052 481 ntBASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm17204-201ENSMUST00000167936 478 ntBASIC14.93□□□□□ -0.02
Rtn4Q99P72 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm2539-203ENSMUST00000181352 746 ntBASIC14.93□□□□□ -0.02
Rtn4Q99P72 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm31306-201ENSMUST00000197517 508 ntBASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm18268-201ENSMUST00000208445 943 ntBASIC14.93□□□□□ -0.02
Rtn4Q99P72 Tmco5-201ENSMUST00000028834 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.93□□□□□ -0.02
Rtn4Q99P72 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.93□□□□□ -0.02
Rtn4Q99P72 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn4Q99P72 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Sla-205ENSMUST00000168589 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC14.92□□□□□ -0.02
Rtn4Q99P72 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.92□□□□□ -0.02
Rtn4Q99P72 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC14.92□□□□□ -0.02
Rtn4Q99P72 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Gm8858-201ENSMUST00000118259 342 ntBASIC14.92□□□□□ -0.02
Rtn4Q99P72 Gm15131-201ENSMUST00000119124 595 ntBASIC14.92□□□□□ -0.02
Rtn4Q99P72 Gm12577-201ENSMUST00000119701 574 ntBASIC14.92□□□□□ -0.02
Rtn4Q99P72 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC14.92□□□□□ -0.02
Rtn4Q99P72 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Rtn4Q99P72 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms