Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm13426-201ENSMUST00000117887 795 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm16288-201ENSMUST00000137940 367 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm7805-201ENSMUST00000154348 448 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm26174-201ENSMUST00000158415 219 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm16228-201ENSMUST00000162286 809 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm18014-201ENSMUST00000183369 817 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm27316-201ENSMUST00000184884 277 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm7445-201ENSMUST00000192115 340 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 AC117769.1-201ENSMUST00000224716 1120 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm10581-201ENSMUST00000097986 231 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.36□□□□□ -0.75
Nkx6-1Q99MA9 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Gm12470-201ENSMUST00000117239 1049 ntBASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Gm6441-201ENSMUST00000120983 696 ntBASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Gm37688-201ENSMUST00000195195 465 ntBASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Gm9353-201ENSMUST00000200472 604 ntBASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Gm9644-201ENSMUST00000212828 1183 ntBASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 AC116797.2-202ENSMUST00000223587 1017 ntBASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 CT030035.1-201ENSMUST00000223964 935 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms