Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd2Q99JR8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm8873-201ENSMUST00000217847 1439 ntBASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm15258-201ENSMUST00000153801 741 ntBASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Mir6359-201ENSMUST00000183668 81 ntBASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm27833-201ENSMUST00000184285 124 ntBASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm18123-201ENSMUST00000210874 822 ntBASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm3926-201ENSMUST00000223378 1123 ntBASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm5278-201ENSMUST00000055957 552 ntBASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Rps3a3-201ENSMUST00000074680 795 ntBASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd2Q99JR8 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gm24294-201ENSMUST00000158295 277 ntBASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gm23582-201ENSMUST00000158530 139 ntBASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gm5244-201ENSMUST00000164001 339 ntBASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gm7985-201ENSMUST00000183329 981 ntBASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gm7255-201ENSMUST00000187371 908 ntBASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gm38038-201ENSMUST00000193803 259 ntBASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.03□□□□□ -0.64
Smarcd2Q99JR8 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms