Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm3332-201ENSMUST00000189337 928 ntBASIC9.35□□□□□ -0.91
Tram1Q91V04 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Tram1Q91V04 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.35□□□□□ -0.91
Tram1Q91V04 Gm45880-201ENSMUST00000213041 853 ntBASIC9.35□□□□□ -0.91
Tram1Q91V04 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Tram1Q91V04 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.35□□□□□ -0.91
Tram1Q91V04 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.35□□□□□ -0.91
Tram1Q91V04 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Tram1Q91V04 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Tram1Q91V04 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
Tram1Q91V04 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Gm28624-201ENSMUST00000186430 2131 ntBASIC9.35□□□□□ -0.91
Tram1Q91V04 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Tram1Q91V04 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.35□□□□□ -0.91
Tram1Q91V04 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tram1Q91V04 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.34□□□□□ -0.91
Tram1Q91V04 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm23931-201ENSMUST00000103842 109 ntBASIC9.34□□□□□ -0.91
Tram1Q91V04 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm14724-201ENSMUST00000118400 537 ntBASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm15824-201ENSMUST00000119516 955 ntBASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm8566-201ENSMUST00000120174 465 ntBASIC9.34□□□□□ -0.91
Tram1Q91V04 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC9.34□□□□□ -0.91
Tram1Q91V04 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm45575-201ENSMUST00000210283 548 ntBASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Prrc1-201ENSMUST00000025490 4801 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Tram1Q91V04 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tram1Q91V04 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.92
Tram1Q91V04 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
Tram1Q91V04 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tram1Q91V04 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Tram1Q91V04 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tram1Q91V04 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
Tram1Q91V04 Gm37242-201ENSMUST00000191873 2085 ntBASIC9.33□□□□□ -0.92
Tram1Q91V04 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tram1Q91V04 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tram1Q91V04 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tram1Q91V04 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Tram1Q91V04 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Tram1Q91V04 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tram1Q91V04 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.33□□□□□ -0.92
Tram1Q91V04 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tram1Q91V04 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms