Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.9□□□□□ -0.34
Cchcr1Q8K2I2 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cchcr1Q8K2I2 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.9□□□□□ -0.35
Cchcr1Q8K2I2 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cchcr1Q8K2I2 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Gm16165-201ENSMUST00000160140 795 ntBASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Gm9645-201ENSMUST00000197131 792 ntBASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cchcr1Q8K2I2 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Gm40414-201ENSMUST00000197608 481 ntBASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Gm43378-201ENSMUST00000199336 582 ntBASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.88□□□□□ -0.35
Cchcr1Q8K2I2 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms