Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm20796-201ENSMUST00000180355 5838 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm43380-201ENSMUST00000200421 220 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm44647-201ENSMUST00000207402 428 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm30671-201ENSMUST00000214898 318 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gm11560-201ENSMUST00000117567 948 ntBASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gm12948-201ENSMUST00000119406 682 ntBASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.74□□□□□ -0.37
Vps53Q8CCB4 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gm26989-201ENSMUST00000182608 749 ntBASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.74□□□□□ -0.37
Vps53Q8CCB4 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gm6423-201ENSMUST00000204315 934 ntBASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps53Q8CCB4 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms